Gary Burnett – NVIDIA Technical Blog News and tutorials for developers, data scientists, and IT admins 2025-06-12T23:09:50Z http://www.open-lab.net/blog/feed/ Gary Burnett <![CDATA[Driving Toward Billion-Cell Analysis and Biological Breakthroughs with RAPIDS-singlecell]]> http://www.open-lab.net/blog/?p=101481 2025-06-12T23:09:50Z 2025-06-12T13:00:00Z The future of cell biology and virtual cell models is dependent on measuring and analyzing data at scale. Single-cell experiments have been growing at an...]]>

The future of cell biology and virtual cell models is dependent on measuring and analyzing data at scale. Single-cell experiments have been growing at an incredible rate over the last 10 years, beginning with hundreds of cells and now moving towards new data generation efforts with billions of cells. With virtual cell models, billions of virtual cells are also being generated.

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Gary Burnett <![CDATA[Cell Imaging Feature Extraction and Morphology Clustering for Spatial Omics]]> http://www.open-lab.net/blog/?p=85873 2024-08-09T14:47:02Z 2024-07-24T20:16:10Z VISTA-2D is a new foundational model from NVIDIA that can quickly and accurately perform cell segmentation, a fundamental task in cell imaging and spatial omics...]]>

VISTA-2D is a new foundational model from NVIDIA that can quickly and accurately perform cell segmentation, a fundamental task in cell imaging and spatial omics workflows that is critical to the accuracy of all downstream tasks. The VISTA-2D model uses an image encoder to create image embeddings, which it can then turn into segmentation masks (Figure 1). The embeddings must contain…

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Gary Burnett <![CDATA[GPU-Accelerated Tools Added to NVIDIA Clara Parabricks v3.6 for Cancer and Germline Analyses]]> http://www.open-lab.net/blog/?p=36621 2022-08-21T23:52:34Z 2021-08-24T17:09:17Z The release of NVIDIA Clara Parabricks v3.6 brings new applications for variant calling, annotation, filtering, and quality control to its suite of powerful...]]>

The release of NVIDIA Clara Parabricks v3.6 brings new applications for variant calling, annotation, filtering, and quality control to its suite of powerful genomic analysis tools. Now featuring over 33 accelerated tools for every stage of genomic analysis, NVIDIA Clara Parabricks provides GPU-accelerated bioinformatic pipelines that can scale for any workload. As genomes and exomes are…

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Gary Burnett <![CDATA[Object Detection on GPUs in 10 Minutes]]> http://www.open-lab.net/blog/?p=15047 2022-08-21T23:39:32Z 2019-06-26T19:00:39Z Object detection remains the primary driver for applications such as autonomous driving and intelligent video analytics. Object detection applications require...]]>

Object detection remains the primary driver for applications such as autonomous driving and intelligent video analytics. Object detection applications require substantial training using vast datasets to achieve high levels of accuracy. NVIDIA GPUs excel at the parallel compute performance required to train large networks in order to generate datasets for object detection inference.

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